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Animal Science Papers and Reports

121 Animal Science Papers and Reports vol. 32 (2014) no. 2, 121-130 Institute of Genetics and Animal Breeding, Jastrzębiec, Poland Comparison of different Hungarian Grey herds as based on microsatellite analysis

Attila Zsolnai
Research Institute for Animal Breeding and Nutrition, Herceghalom, Hungary
Abstract :
The present study aimed at assessing the genetic position of the Hungarian Gray population.
Hungarian Grey cattle kept at different farms in Hungary have been sampled (34 herds, n=3,187 in
the period of 2009-2011) to investigate their genetic relationship based on analysis of allelic variation
at eleven microsatellite
loci
. The mean observed heterozygosities per herd were above a moderate
degree (0.60-0.80). Calculation of pairwise genetic distances and analysis of the history of herds
revealed that among the most closely related herds we can find those, which are the core of the
current Hungarian Gray population. The results of the population differentiation showed that all
Hungarian Gray herds were significantly different from each other. In most cases (22 herds) F
ST
values were within a range of low degree of genetic differentiation (0.003-0.050), while the remaining
12 herds differed from the central population by F
ST
values of 0.060-0.119. Principal coordinate
analysis, assignment tests and dendrograms all suggest that there are mainly two different groups
among Hungarian Grey herds. Structure analysis has yielded K=3 as the most probable number
of clusters. Based on the private allelic richness, genetic distance and F
IS
values identified were
12 herds where more attention should be paid by the management to avoid genetic drift and to
preserve genetic diversity. The results presented could also contribute to the proper selection of
animals for further whole genome scan studies of Hungarian Grey.
Keywords :
attle / genetic distance / herds / Hungarian Grey cattle / microsatellite

Date Deposited : 02 Apr 2015 10:43

Last Modified : 02 Apr 2015 10:43

Official URL: http://www.ighz.edu.pl/?p0=5&p1=34

Volume 32, Number 2, - 2014

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